The list of related mutation databases

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The list of related mutation databases The list of related mutation databases

Acknowledgement: JST acknowledges these databases for assisting our service.

database abbreviation institutes managing database comments

dbSNP National center for Biotechnology Information (NCBI) Single nucleotide polymorphisms, small-scale insertions/deletions, polymorphic repetitive elements, and microsatellite variation

HGVbase The Karolinska Institute (Sweden), the European Bioinformatics Institute (UK). The Human Genome Variation Database) is to provide an accurate, high utility and ultimately fully comprehensive catalog of normal human gene and genome variation

HapMap HapMap Cold Spring Harbor Laboratory The genotype and frequency data produced as part of the International Haplotype Map Project

PharmGKB Stanford University. An integrated resource about how variation in human genes leads to variation in our response to drugs

HGMD Cardiff University Human gene mutation database

ALFRED Yale University A resource of gene frequency data on human population

Ensembl EMBL - European Bioinformatics Institute (EBI) and the Wellcome Trust Sanger Institute (WTSI) The Ensembl project provides automated genome annotation and subsequent visualisation of the annotated genomes.

JG-SNP JG-SNP Tokyo Metropolitan Geriatric Medical Center Number of autopsy cases: 1,375 cases Relationship between geriatric diseases and SNP

dbProP dbProP National Institute of Radiological Sciences Information on amino acid polymorphisms and splicing variants found in protein coding region

PSC PSC Pharma SNP consortium SNPs and allele frequencies in a pharmacokinetics-related genes

JMDBase International Medical Center of Japan 401 Genes & 5914 SNPs

DrugBank University of Alberta A comprehensive resource for in silico drug discovery and exploration.

A Catalog of Published GWAS National Human Genome Research Institute A Catalog of Published Genome-Wide Association Studies.

database abbreviation	institutes managing database	comments
dbSNP	National center for Biotechnology Information (NCBI)	Single nucleotide polymorphisms, small-scale insertions/deletions, polymorphic repetitive elements, and microsatellite variation
HGVbase	The Karolinska Institute (Sweden), the European Bioinformatics Institute (UK).	The Human Genome Variation Database) is to provide an accurate, high utility and ultimately fully comprehensive catalog of normal human gene and genome variation
HapMap	HapMap	Cold Spring Harbor Laboratory	The genotype and frequency data produced as part of the International Haplotype Map Project
PharmGKB	Stanford University.	An integrated resource about how variation in human genes leads to variation in our response to drugs
HGMD	Cardiff University	Human gene mutation database
ALFRED	Yale University	A resource of gene frequency data on human population
Ensembl	EMBL - European Bioinformatics Institute (EBI) and the Wellcome Trust Sanger Institute (WTSI)	The Ensembl project provides automated genome annotation and subsequent visualisation of the annotated genomes.
JG-SNP	JG-SNP	Tokyo Metropolitan Geriatric Medical Center	Number of autopsy cases: 1,375 cases Relationship between geriatric diseases and SNP
dbProP	dbProP	National Institute of Radiological Sciences	Information on amino acid polymorphisms and splicing variants found in protein coding region
PSC	PSC	Pharma SNP consortium	SNPs and allele frequencies in a pharmacokinetics-related genes
JMDBase	International Medical Center of Japan	401 Genes & 5914 SNPs
DrugBank	University of Alberta	A comprehensive resource for in silico drug discovery and exploration.
A Catalog of Published GWAS	National Human Genome Research Institute	A Catalog of Published Genome-Wide Association Studies.

The Locus Information has links to the DrugBank database(http://redpoll.pharmacy.ualberta.ca/drugbank/) and it is available to search using "Generic Name" of the drug.

Acknowledgement: JST acknowledges the DrugBank database for assisting our service. please cite the following reference;
Wishart DS et al., DrugBank: a comprehensive resource for in silico drug discovery and exploration.
Nucleic Acids Res. 2006 1;34